PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.supercontig_33.29
Organism
Carica papaya
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
Family ERF
Protein Properties Length: 371aa    MW: 40420.8 Da    PI: 5.8325
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.supercontig_33.29genomeASGPBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.51.4e-1762111255
                          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                                  +y+GVr+++ +gr++AeIrdp     +  r +lg+f+taeeAa a++ a+++++g
  evm.model.supercontig_33.29  62 RYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEEAACAYDCAARAMRG 111
                                  59*******.**********93....35999**********************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008474.0E-1162111IPR001471AP2/ERF domain
SuperFamilySSF541713.07E-2162119IPR016177DNA-binding domain
PROSITE profilePS5103222.11562119IPR001471AP2/ERF domain
SMARTSM003803.0E-3362125IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.0E-2962118IPR001471AP2/ERF domain
CDDcd000185.09E-3062118No hitNo description
PRINTSPR003672.0E-96374IPR001471AP2/ERF domain
PRINTSPR003672.0E-985101IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009733Biological Processresponse to auxin
GO:0009880Biological Processembryonic pattern specification
GO:0048825Biological Processcotyledon development
GO:0051726Biological Processregulation of cell cycle
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    Send to blast
MEEALRRLNG MNHVLESDPS DSLPDHQRKC TITAATATPA VNATASNKRS LKENGGNGGT  60
MRYRGVRRRP WGRYAAEIRD PQSKERRWLG TFDTAEEAAC AYDCAARAMR GLKARTNFVY  120
PTAPEPHPSA DHLLPASFNF SKQSQPSSRH FPPSSHWPSA ANYPLGDISC GSPSRRNPSL  180
NVLVLRDFLN SSSSSSSCSQ LSYDQFPCTL PLGFSANPFD SFTTSVPPAD DHCQGQNSGE  240
QVINGCTQAD GEINFLPQES PDSGLLQEII QGFFPKPLAK IHNDDCLKGS CYTQQHPVTE  300
IQEGMKSEIK TEPCDAYFRG GPQQLQSLNG LVGNGEEMAG SFQVGEVSIL DDIFQYPELL  360
SSIAARVQNT *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A8e-19621181471Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapevm.model.supercontig_33.29
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021901319.10.0ethylene-responsive transcription factor ESR2-like
TrEMBLA0A2C9USX45e-94A0A2C9USX4_MANES; Uncharacterized protein
STRINGevm.model.supercontig_33.290.0(Carica papaya)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM73552541
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24590.13e-19DORNROSCHEN-like