PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.supercontig_33.182

Organism

Carica papaya

Taxonomic ID

3649

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica

Family

bZIP

Protein Properties

Length: 318aa MW: 35396.6 Da PI: 7.2555

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.supercontig_33.182	genome	ASGPB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	47.3	4.5e-15	247	295	5	54
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 ++++r++kNRe+A rsR+RK+a++ eLe+kv Le+eN++L+ + +el++ evm.model.supercontig_33.182 247 RKQKRMIKNRESAARSRARKQAYTHELENKVSRLEEENERLR-RQKELEN 295 689**************************************9.6666665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	2.3E-13	239	294	No hit	No description
SMART	SM00338	7.3E-13	243	311	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.576	245	290	IPR004827	Basic-leucine zipper domain
CDD	cd14707	5.04E-24	247	301	No hit	No description
SuperFamily	SSF57959	2.75E-11	247	292	No hit	No description
Pfam	PF00170	5.4E-12	247	290	IPR004827	Basic-leucine zipper domain
PROSITE pattern	PS00036	0	250	265	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0009737	Biological Process	response to abscisic acid
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 318 aa Download sequence Send to blast
MGSEGGEPNL QNLATQTSLY NLTLDEVQNQ LGNLGKPLGS MNLDELLKSV CSAEVNQSTP 60 LADDNVGITY TASGSALSRQ GSLALSRDLS RKTVDEVWRD IQKSKNKNDQ ERRCQERQLT 120 FGGMTLEDFL LKAGVVSEPT HVHVLGVESV IFSQPNIPHH PHWNQYQLPS LQQQQQQQHQ 180 QDVMALVPGQ PTQHPLPVGV NPDAAYPETQ VTISPSSLMG TLSDTQAQAP GRKRVASEDV 240 AEKNVERKQK RMIKNRESAA RSRARKQAYT HELENKVSRL EEENERLRRQ KELENALPCA 300 PPPEPKYQLR RTSSAPF*

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00409	DAP	Transfer from AT3G56850	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	evm.model.supercontig_33.182

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_021901347.1	0.0	ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
Swissprot	Q9LES3	1e-100	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	A0A068VAQ2	1e-125	A0A068VAQ2_COFCA; Uncharacterized protein
STRING	evm.model.supercontig_33.182	0.0	(Carica papaya)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM1884	28	83
Representative plant	OGRP540	15	80

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	6e-89	ABA-responsive element binding protein 3

Link Out ? help Back to Top
Phytozome	evm.model.supercontig_33.182

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]