PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.supercontig_314.7
Organism
Carica papaya
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
Family G2-like
Protein Properties Length: 440aa    MW: 48352.2 Da    PI: 10.4952
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.supercontig_314.7genomeASGPBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like66.64.1e-2153106155
                      G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                                  k+rl+W+p+L ++F  av+ L G++ A Pktil++m+v++Lt  +v+SHLQkY+ 
  evm.model.supercontig_314.7  53 KQRLVWNPDLKSKFTAAVNAL-GKNDARPKTILNMMDVPDLTQRQVASHLQKYKA 106
                                  79*******************.99*****************************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.607.7E-2251107IPR009057Homeodomain-like
SuperFamilySSF466894.12E-1451106IPR009057Homeodomain-like
TIGRFAMsTIGR015571.6E-1753105IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 440 aa     Download sequence    Send to blast
MDPLGMSKSS QNTPVSKRKE PNAGAENGKS KVRKTRFGEE DDEDDKGENS AKKQRLVWNP  60
DLKSKFTAAV NALGKNDARP KTILNMMDVP DLTQRQVASH LQKYKAQAQP LPESKFPLTS  120
LLLGNQINDS GPALPMRENS SLLQSRSLQN RAHNSSSFRQ FRSSSQRLQI NNARVQAGSS  180
RPWLQNSNSV LQPGSPALAM PGNNSVLQPE SPMLAMQGNN PVRRPGSASS LNLQNNISML  240
QSGSSGNMQH NISLLQPGFP FRWQQTDVPM LHPGANENYL MHINNSLLQI GSSFNNVQNN  300
ASRMQVGSSF GVQTHTSILQ PGSSLNWVQN NLPMFQRTPS FNFWGNNKLL QCESLLDEPD  360
EDLLLYHGPL PQWLQETLLV LRQGSSSSSH GFQNYISILQ PGFSSHSMNW VPIQLGGGNS  420
GLPSGGNTIQ TRFSHPIVK*
Cis-element ? help Back to Top
SourceLink
PlantRegMapevm.model.supercontig_314.7
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021912197.10.0two-component response regulator ARR10-like
STRINGevm.model.supercontig_314.70.0(Carica papaya)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP8222311
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.15e-14response regulator 2