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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
evm.model.supercontig_30.163 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
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Family |
MIKC_MADS |
Protein Properties |
Length: 127aa MW: 14379.9 Da PI: 9.2328 |
Description |
MIKC_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
evm.model.supercontig_30.163 | genome | ASGPB | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 31.5 | 2.2e-10 | 2 | 25 | 19 | 42 |
HHHHHHHHHHHHHT-EEEEEEE-T CS
SRF-TF 19 gilKKAeELSvLCdaevaviifss 42
g++KK + L++LCd++++vii+s+
evm.model.supercontig_30.163 2 GLMKKVSKLCTLCDVKACVIIYSP 25
9**********************8 PP
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2 | K-box | 15.1 | 9.7e-07 | 51 | 91 | 32 | 73 |
K-box 32 qreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnell 73
+ eq + +G++L++L+l +L+ L +e+ lk+i + K+e l
evm.model.supercontig_30.163 51 EMEQSKKMGKSLHQLNLIDLNDLGWLIEQHLKEIQK-KMETL 91
468899****************************75.55554 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 127 aa
Download sequence Send
to blast |
MGLMKKVSKL CTLCDVKACV IIYSPYDSQP DVWPSPLGAQ HVLADFKRMP EMEQSKKMGK 60 SLHQLNLIDL NDLGWLIEQH LKEIQKKMET LNKSPQPQEV RDGGVMKGPS ETFTQIKENS 120 RVKKLQ*
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor. Controls central cell differentiation during female gametophyte development. Required for the expression of DEMETER and DD46, but not for the expression of FIS2 (PubMed:16798889). Probable transcription factor that may function in the maintenance of the proper function of the central cell in pollen tube attraction (Probable). {ECO:0000269|PubMed:16798889, ECO:0000305|PubMed:26462908}. |