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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
evm.model.supercontig_3.342 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
|
| Family |
G2-like |
| Protein Properties |
Length: 386aa MW: 42426.5 Da PI: 8.981 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| evm.model.supercontig_3.342 | genome | ASGPB | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 101.8 | 4.3e-32 | 243 | 296 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
pr+rWt+ LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
evm.model.supercontig_3.342 243 PRMRWTTSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 296
9****************************************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009887 | Biological Process | organ morphogenesis |
| GO:0009944 | Biological Process | polarity specification of adaxial/abaxial axis |
| GO:0009956 | Biological Process | radial pattern formation |
| GO:0010051 | Biological Process | xylem and phloem pattern formation |
| GO:0010158 | Biological Process | abaxial cell fate specification |
| GO:0048481 | Biological Process | plant ovule development |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 386 aa
Download sequence Send
to blast |
MSGKGVFSTD IQQPSLNPIP DLSLHISPPN SAPSSICTGP NDLDIWRKED DSSGLKSHSD 60
SSIKADTELS LANPTTFEAE SPWRRRDQAT RPNTGGFNFG GCSSSESMSR INHGISWLDV 120
SGLKPIKGIP VYNNCGFPLS SASSDHGENM DRRFSSYQTA SYASSSSSSV LSSSTNYASK 180
SPLPSYYNRM GRSPKFNGLP METVRSQYEY YGGGFGGAEM CSNGMIRSRF IPKLQSKRNM 240
RAPRMRWTTS LHARFVHAVE LLGGHERATP KSVLELMDVK DLTLAHVKSH LQMYRTVKST 300
DKAAPSSDGS GDEDFLASST RSLQQINNIN SNSLLNQRET LNSPAEHHNP CASPNLWSNS 360
SRYVELVKLQ PKFVLFMELK KCFCL*
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4k_A | 3e-17 | 244 | 298 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4k_B | 3e-17 | 244 | 298 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_A | 2e-17 | 244 | 298 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 2e-17 | 244 | 298 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 2e-17 | 244 | 298 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 2e-17 | 244 | 298 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_A | 3e-17 | 244 | 298 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_C | 3e-17 | 244 | 298 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_D | 3e-17 | 244 | 298 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_F | 3e-17 | 244 | 298 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_H | 3e-17 | 244 | 298 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_J | 3e-17 | 244 | 298 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
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