![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | evm.model.supercontig_3.213 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 211aa MW: 23567.8 Da PI: 9.9313 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 45.9 | 1.2e-14 | 96 | 154 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +r rr+++NRe+ArrsR RKk +ieeL+ v++L + N++L +++ +l + ++ +e+ evm.model.supercontig_3.213 96 RRIRRMASNRESARRSRMRKKRQIEELQSQVDQLLTMNHQLSEKVIRLLESNHQVMQEN 154 799******************************************99999888877765 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 4.5E-16 | 92 | 156 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.8E-12 | 93 | 150 | No hit | No description |
PROSITE profile | PS50217 | 11.415 | 94 | 157 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 7.5E-12 | 96 | 153 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.31E-11 | 96 | 148 | No hit | No description |
CDD | cd14702 | 7.39E-15 | 97 | 148 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 99 | 114 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 211 aa Download sequence Send to blast |
MEAREMKILT APSHVSSLPN SLPLCSTPPP SSQLIINKQP CSHEFSLDHS NTSAAFFNRF 60 LSPLQIFSPN TTSSLSGDSA LIDGNKEQPA NIIDERRIRR MASNRESARR SRMRKKRQIE 120 ELQSQVDQLL TMNHQLSEKV IRLLESNHQV MQENGQLKEK VSSLQLVLSD ILTPLRSNVE 180 QEMSRGVNHI RGVEASNQSA IMDLVSRKGA * |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | evm.model.supercontig_3.213 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_021909366.1 | 1e-151 | basic leucine zipper 43-like | ||||
TrEMBL | A0A2C9VQA5 | 3e-46 | A0A2C9VQA5_MANES; Uncharacterized protein | ||||
STRING | evm.model.supercontig_3.213 | 1e-150 | (Carica papaya) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM6185 | 25 | 45 | Representative plant | OGRP11810 | 4 | 5 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G60830.1 | 2e-41 | basic leucine-zipper 70 |
Link Out ? help Back to Top | |
---|---|
Phytozome | evm.model.supercontig_3.213 |