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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
evm.model.supercontig_282.15 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
|
| Family |
LBD |
| Protein Properties |
Length: 268aa MW: 28953 Da PI: 8.405 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| evm.model.supercontig_282.15 | genome | ASGPB | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 100.8 | 1.3e-31 | 4 | 107 | 1 | 99 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGa 76
+C++C+vlr++C+++C ++p++ p++q++++ +++k++G++ +++l++a p++ r+++++sl+yeA+ r+ +P+yG+
evm.model.supercontig_282.15 4 SCNGCRVLRKGCSDNCSIRPCLqwiksPESQANATVFLAKFYGRAGLMNLINAGPDHLRPAIFRSLLYEACGRIVNPIYGS 84
6******************************************************************************** PP
DUF260 77 vgvilklqqqleqlkaelallke 99
vg+++++++ql+q+++e++l ++
evm.model.supercontig_282.15 85 VGLLWSGSWQLCQAAVEAVLKGA 107
*****************998766 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 268 aa
Download sequence Send
to blast |
MRMSCNGCRV LRKGCSDNCS IRPCLQWIKS PESQANATVF LAKFYGRAGL MNLINAGPDH 60
LRPAIFRSLL YEACGRIVNP IYGSVGLLWS GSWQLCQAAV EAVLKGAPIT PIASEAAANG 120
HGPPLKAYDI RHVSKDENSA ASNDHQRVKT RCRARRVVKP KPSKPELGSA AEPLMNRSTS 180
HESSLSHQSE VAVVDGESKE TESMVSVETA EASLLLRAET GNESGGVEDG VELELRLGLE 240
PVARANHVVP MKKRRIEENT WNMGLGL*
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