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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
evm.model.supercontig_28.61 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
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Family |
GRF |
Protein Properties |
Length: 225aa MW: 25601 Da PI: 10.2176 |
Description |
GRF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
evm.model.supercontig_28.61 | genome | ASGPB | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRC | 79.6 | 2.9e-25 | 69 | 112 | 1 | 44 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44
d+epgrCrRtDGKkWRCs+++++++k+CErH+hrg++rsrk++e
evm.model.supercontig_28.61 69 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVE 112
79***************************************998 PP
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2 | QLQ | 62 | 1.6e-21 | 8 | 43 | 2 | 37 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37
+FTa+Q+q+L++Q+l++Ky++++ P+Pp+Ll+ai++
evm.model.supercontig_28.61 8 PFTASQWQELEHQALIFKYMVSGIPIPPDLLFAIKR 43
8*********************************85 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 225 aa
Download sequence Send
to blast |
MSARNRFPFT ASQWQELEHQ ALIFKYMVSG IPIPPDLLFA IKRSCIDSPL SSRHIGWNCF 60 PMGLGRKIDP EPGRCRRTDG KKWRCSKEAY PDSKYCERHM HRGKNRSRKP VEVTTTTTTS 120 TQTISSIAKT PSSFAPSSHS LSSISSSETT HHHHLQYPYN HHPFLYSHTS SSRSAGIALP 180 PQDNTAHLFL ESASYSQADT DYRFVIVHKW TRLLSVPRKL DFRV*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015042 | 3e-39 | AP015042.1 Vigna angularis var. angularis DNA, chromosome 9, almost complete sequence, cultivar: Shumari. |