PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica

Family

G2-like

Protein Properties

Length: 119aa MW: 13541.6 Da PI: 10.7901

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.supercontig_2794.2	genome	ASGPB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	95.4	4.4e-30	69	117	3	51
G2-like 3 rlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 rlrWtp+LH++Fv+ave+LGG+++AtPk +l++m+vkgLt++hvkSHLQ evm.model.supercontig_2794.2 69 RLRWTPDLHHCFVHAVERLGGEDRATPKMVLQIMDVKGLTISHVKSHLQ 117 9************************************************ PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	11.256	64	118	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	7.2E-28	64	117	IPR009057	Homeodomain-like
SuperFamily	SSF46689	2.87E-13	69	117	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	3.1E-22	69	118	IPR006447	Myb domain, plants
Pfam	PF00249	6.9E-7	69	117	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 119 aa Download sequence Send to blast
MKRRGNGDLK TSLSSSSSSS LETISLHEYY NKSNYHMRVT RPRVEVNPVT VPEMRSTGVR 60 PYVRSKMLRL RWTPDLHHCF VHAVERLGGE DRATPKMVLQ IMDVKGLTIS HVKSHLQV*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	2e-19	69	117	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	2e-19	69	117	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A	2e-19	69	117	3	51	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	2e-19	69	117	3	51	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	2e-19	69	117	3	51	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	2e-19	69	117	3	51	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	2e-19	69	117	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	2e-19	69	117	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	2e-19	69	117	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	2e-19	69	117	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	2e-19	69	117	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	2e-19	69	117	4	52	Protein PHOSPHATE STARVATION RESPONSE 1
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Functional Description ? help Back to Top
Source	Description
UniProt	Putative transcription factor.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	evm.model.supercontig_2794.2

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_021887158.1	7e-80	uncharacterized protein LOC110806563, partial
Swissprot	Q700D9	2e-26	MYBF_ARATH; Putative Myb family transcription factor At1g14600
TrEMBL	A0A2I4H0Z6	5e-38	A0A2I4H0Z6_JUGRE; uncharacterized protein LOC109012570
TrEMBL	A0A2I4H9B6	5e-38	A0A2I4H9B6_JUGRE; uncharacterized protein LOC109014695
TrEMBL	A0A2I4HP29	8e-39	A0A2I4HP29_JUGRE; protein PHOSPHATE STARVATION RESPONSE 1-like
STRING	evm.model.supercontig_2794.2	6e-82	(Carica papaya)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM363	28	184
Representative plant	OGRP285	15	123

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02060.1	3e-31	G2-like family protein

Link Out ? help Back to Top
Phytozome	evm.model.supercontig_2794.2