 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
evm.model.supercontig_26.173 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
|
| Family |
WOX |
| Protein Properties |
Length: 226aa MW: 25870.2 Da PI: 7.6282 |
| Description |
WOX family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| evm.model.supercontig_26.173 | genome | ASGPB | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 67.2 | 2.2e-21 | 83 | 143 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
r+R+++t+ ql++Le+ +e+ n +ps+++++e++++l +++e++V++WFqNrRa+ k+
evm.model.supercontig_26.173 83 RQRWNPTSMQLQILESIYEQgNGTPSKQKIKEITNQLaqhgQISEANVYNWFQNRRARSKR 143
89*****************99**************************************97 PP
|
| 2 | Wus_type_Homeobox | 101.6 | 5.4e-33 | 82 | 145 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
+r+RW+Pt+ Q++iLe++y++G tP+k++i++it++L+++G+i+++NV++WFQNr+aR+++kq
evm.model.supercontig_26.173 82 TRQRWNPTSMQLQILESIYEQGNGTPSKQKIKEITNQLAQHGQISEANVYNWFQNRRARSKRKQ 145
689***********************************************************97 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0001944 | Biological Process | vasculature development |
| GO:0010072 | Biological Process | primary shoot apical meristem specification |
| GO:0051301 | Biological Process | cell division |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 226 aa
Download sequence Send
to blast |
MEWQNEAEQV ESAQSQNWLN VKVMTDDQME LLRKQISIYA TICEQLIEMR KAISVHHDFP 60
GIRVGNPYCY QLVGSGGHKI STRQRWNPTS MQLQILESIY EQGNGTPSKQ KIKEITNQLA 120
QHGQISEANV YNWFQNRRAR SKRKQQFQNN IIQSQSPQLL DSPHPTDKKT RSADIIHSYE 180
NLFYQTPDLG IEHLLGKMEA PPSLTSYCLV EPYDTVGSSS PKAFM*
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 136 | 144 | RRARSKRKQ |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor which may be involved in developmental processes. {ECO:0000250}. |
