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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
evm.model.supercontig_2586.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
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Family |
NAC |
Protein Properties |
Length: 329aa MW: 37180.5 Da PI: 7.1251 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
evm.model.supercontig_2586.1 | genome | ASGPB | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 103.6 | 2.6e-32 | 57 | 198 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......lelee.vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkr 73
lp+G++F+Ptd+e++ e+L++kv ++ ++++ ++k +i++++P +Lp v+++ + +fF++ +k+y+tg+r
evm.model.supercontig_2586.1 57 LPAGVKFDPTDQEIL-EHLEAKVLSDVrklhplIDEFIpTLKGEnGICYTHPGRLP-GVSKDGQIRHFFHRPSKAYTTGTR 135
799***********9.99****999885664442222222444447**********.555666777*************** PP
NAM 74 knratk.......sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
k+r+++ + +W++tgk+++vl+ +g +g kk+Lv+y gr++k+ekt+Wvmh+y+l
evm.model.supercontig_2586.1 136 KRRKVHnneedgsETRWHKTGKTRPVLV-DGVIKGFKKILVLYtnYGRQRKPEKTNWVMHQYHL 198
***7444455444788************.99************66589**************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:2000652 | Biological Process | regulation of secondary cell wall biogenesis |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 329 aa
Download sequence Send
to blast |
MTWCNNTDDE DDDHDHDPPI SSNSKIQQQI RTISCPSCGF IIHYQDDQGG ISDLPGLPAG 60 VKFDPTDQEI LEHLEAKVLS DVRKLHPLID EFIPTLKGEN GICYTHPGRL PGVSKDGQIR 120 HFFHRPSKAY TTGTRKRRKV HNNEEDGSET RWHKTGKTRP VLVDGVIKGF KKILVLYTNY 180 GRQRKPEKTN WVMHQYHLGN NEEEKDGELV LSKVFYQTQP RHCGSSSTTS VIKDLVINNF 240 ESGSVKRRIL TTELLHVQDD RNITTSATLV DFYNNPPPFI AYDHGSCHRN TESSPHDLIP 300 NLVVQGDNGS SFINPFSSDT SKARLQRN*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that plays a regulatory role in the development of secondary cell wall fibers. Is a direct target of SND1. {ECO:0000269|PubMed:18952777}. |