 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
evm.model.supercontig_25.118 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
|
| Family |
GRF |
| Protein Properties |
Length: 344aa MW: 38793.1 Da PI: 8.642 |
| Description |
GRF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| evm.model.supercontig_25.118 | genome | ASGPB | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRC | 77.7 | 1.2e-24 | 79 | 122 | 1 | 44 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44
d+epgrCrRtDGKkWRCs+++++++k+CErH+hrgr+rs k++e
evm.model.supercontig_25.118 79 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSGKPVE 122
79**************************************9987 PP
|
| 2 | QLQ | 55.7 | 1.5e-19 | 13 | 47 | 2 | 36 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36
+FTa Q+q+L++Q+l++KyL++++PvPpeL+ +++
evm.model.supercontig_25.118 13 PFTAIQWQELEHQALIFKYLVSGVPVPPELICFVK 47
9*****************************97776 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 344 aa
Download sequence Send
to blast |
MDQRMMSARN RCPFTAIQWQ ELEHQALIFK YLVSGVPVPP ELICFVKRSL QYSSVSSRLF 60
PHQPIGWGYF QMGFGRKADP EPGRCRRTDG KKWRCSKEAY PDSKYCERHM HRGRNRSGKP 120
VEVTNISAPS SSSSSSSSSS SSLSSSISSL SSVKRNFPNI PPTTTTISSS PFSSTSDLYS 180
HTHNDLSHLN PFLYSSSSRL HHPDSDLSLQ NNTTHHNFLD FGSSQSQTDK DFRYFEGTSE 240
GMDEKSFKSF FPEASGSIRN FNNSYQQQPW TTSYKSFPSQ EPSIQHLQTL AYNPNQLHHH 300
DQQHCFVLDN VAKATMMKLY TMAEKVLGSA AEVCAKLWPA EVD*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription activator that plays a role in the regulation of cell expansion in leaf and cotyledons tissues. Acts together with GIF1 for the development of appropriate leaf size and shape through the promotion and/or maintenance of cell proliferation activity in leaf primordia. {ECO:0000269|PubMed:15326298, ECO:0000269|PubMed:15960617}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | HG975446 | 2e-47 | HG975446.1 Solanum pennellii chromosome ch07, complete genome. |
| GenBank | HG975519 | 2e-47 | HG975519.1 Solanum lycopersicum chromosome ch07, complete genome. |
