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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
evm.model.supercontig_25.11 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
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Family |
MIKC_MADS |
Protein Properties |
Length: 258aa MW: 29171.3 Da PI: 6.5302 |
Description |
MIKC_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
evm.model.supercontig_25.11 | genome | ASGPB | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 37.5 | 2.9e-12 | 18 | 66 | 2 | 50 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
+i n+ r+ ++ kR +++ KA+ L +L d+ v+v+ f+++gkl +++
evm.model.supercontig_25.11 18 FIANNNARNASWKKRIQTLKLKAHQLATLADVSVSVLCFAPDGKLDTWP 66
799*********************************************8 PP
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2 | K-box | 14.7 | 1.3e-06 | 115 | 164 | 27 | 76 |
K-box 27 eienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleq 76
ei+ ++ + + L++L eL+++ +L+ l++ R+++++lll++
evm.model.supercontig_25.11 115 EIDGVKEAKSCTSEQRLDELPKSELMNMMGRLDFTLQRLRERRDQLLLDK 164
44444444444445689******************************986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 258 aa
Download sequence Send
to blast |
METSIPNPTN KRNRSLQFIA NNNARNASWK KRIQTLKLKA HQLATLADVS VSVLCFAPDG 60 KLDTWPENPT EVKQIVMNYK NCVDRDPRQG KGSENVDLSS FLETKKRKIQ EEKSEIDGVK 120 EAKSCTSEQR LDELPKSELM NMMGRLDFTL QRLRERRDQL LLDKNNVPLP SDNFAVTGFN 180 DNMGSLQAFC SENEKINNGG SGNFITSCDM FGYQPMLMPP FQVVPDHQLM LIPPFQVVSS 240 DQAMLMPSFQ EPLPLSW*
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