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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
evm.model.supercontig_2461.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
|
| Family |
Trihelix |
| Protein Properties |
Length: 338aa MW: 36645 Da PI: 5.2085 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| evm.model.supercontig_2461.1 | genome | ASGPB | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 90.4 | 2e-28 | 41 | 135 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrt 72
rWt+qe+l+Li+++r e+r+rrg+ + +p+W++vs++++++g++r+p+qC+++w+nl++++kkike+e++ +
evm.model.supercontig_2461.1 41 RWTRQEILVLIQGKRVAENRVRRGRtagmafgsgQVEPKWASVSSYCKRHGVNRGPVQCRKRWSNLAGDFKKIKEWESQIK 121
8**********************97778888888*********************************************** PP
trihelix 73 sessstcpyfdqle 86
+e++s +++ ++l+
evm.model.supercontig_2461.1 122 EETESFWVMRNDLR 135
999999*9999986 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated |
| GO:0050777 | Biological Process | negative regulation of immune response |
| GO:0071219 | Biological Process | cellular response to molecule of bacterial origin |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0042803 | Molecular Function | protein homodimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 338 aa
Download sequence Send
to blast |
MALEQLSLVS NPVDGVTNGV EGRPASTDGG DDGSRAPRLP RWTRQEILVL IQGKRVAENR 60
VRRGRTAGMA FGSGQVEPKW ASVSSYCKRH GVNRGPVQCR KRWSNLAGDF KKIKEWESQI 120
KEETESFWVM RNDLRRERKL PGFFDKEVYD ILDGGTAVTT PGLALALAPA PAASGVAEEA 180
EAVFDSGRSA AAEDGLFSDF EQEEATGSPD KDAAKPVAAP VPISVSEKQY QQSPLGACPG 240
QGAVDDKQPA SVPEIGSTSQ EQRKRKRLAT DGDEEMSNLQ SQLIDILERN GKILTAQLEA 300
QNNNLQLDRE QRKDHADSLV AVLNKLADAL GRIADKL*
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional repressor that binds DNA and plays a negative role in regulating microbe-associated molecular patterns-(MAMPs, e.g. flg22, elf18, chitin, and LPS) triggered immunity (PTI) by negatively regulating immune gene expression. {ECO:0000269|PubMed:25770109}. |
