PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.supercontig_244.3
Organism
Carica papaya
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
Family bZIP
Protein Properties Length: 330aa    MW: 36176.9 Da    PI: 6.288
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.supercontig_244.3genomeASGPBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_151.52.2e-16167218455
                                  XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                       bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                                  lkr rr+++NRe+Ar+sR+RK+a ++ Le  +++L++eN +L k+l   +++
  evm.model.supercontig_244.3 167 LKRLRRMYSNRESARKSRRRKQAHLADLEIQAEQLKGENATLYKQLGDANQQ 218
                                  8******************************************988766655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1706.2E-12163219No hitNo description
SMARTSM003386.3E-14164228IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.369166218IPR004827Basic-leucine zipper domain
PfamPF001705.8E-14167216IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.75E-11167218No hitNo description
CDDcd147024.55E-21169220No hitNo description
PROSITE patternPS000360171186IPR004827Basic-leucine zipper domain
PfamPF124982.4E-5235313IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    Send to blast
MEQKPAQDLS THWGRLGFMK RSDSELALEE FLTKALAGVD SAADNSRVPD SDFDPLHFPH  60
VSSPDLAFSF KDREIVMNAF SSCGGLVTES LLWSQNLPAD TINSQSSVCV GSPFSGNNNN  120
NDNNSNKVKV RGAASPGSDS SQERPSDDEE AEIETGPCEE STDPNVLKRL RRMYSNRESA  180
RKSRRRKQAH LADLEIQAEQ LKGENATLYK QLGDANQQFR DADINNRVLK SNVEALRAKV  240
KLAEDMVARG YLSCGLNLLQ NHLSSNQMAM NIRHNNNNNI NNANVSPTVA IPADHRHHAH  300
SSYPRIHTVE NGIAAASDAL SCVSGIWPN*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1182187SRRRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapevm.model.supercontig_244.3
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021912666.10.0basic leucine zipper 9
TrEMBLF6H3C42e-77F6H3C4_VITVI; Uncharacterized protein
STRINGevm.model.supercontig_244.30.0(Carica papaya)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM63702641
Representative plantOGRP69561017
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24800.14e-54basic leucine zipper 9