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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
evm.model.supercontig_224.4 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
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Family |
AP2 |
Protein Properties |
Length: 427aa MW: 47001.6 Da PI: 8.5904 |
Description |
AP2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
evm.model.supercontig_224.4 | genome | ASGPB | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 54.1 | 3.9e-17 | 67 | 126 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55
s y+GV++++++gr++A+++d ++n+ k+ k+++lg ++ +e Aa+a++ a++k++g
evm.model.supercontig_224.4 67 SIYRGVTRHRWTGRYEAHLWDkSTWNQnqnKKgKQVYLGAYDDEEAAARAYDLAALKYWG 126
57*******************766644468557*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 427 aa
Download sequence Send
to blast |
MASASSSDPG LKPELGVGGG GETSEAVVAN DQLLLYRGLK KAKKERGCTA KERISKMPPC 60 TAGKRSSIYR GVTRHRWTGR YEAHLWDKST WNQNQNKKGK QVYLGAYDDE EAAARAYDLA 120 ALKYWGPGTL INFPVTDYTR DLEEMQNVSR EEYLASLRRK SSGFSRGISK YRGLTSSRWD 180 SSFGRGAAPE YFNSIHYVAG DDPGTESDFL SNFCIERKID LTSYIKWWGT NKTRQADCSS 240 KSSEETKHGC AEDIGGELKT LDWAVQATEP YEMPRLGMFI KGKTPKGSTV SALSILSQSA 300 AYKSLQEKAL KKEKKDSDKE DNENKNTINR PDYGKAVEKS VSHEGGNESL GAALGMGGGL 360 PLQRNMYPLA PILSAPLVTS YNTIDPLADP ILWTSLVPIL PTGSSRNPEV TKTETSSTYT 420 FFQPEE*
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |