PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.supercontig_211.22
Organism
Carica papaya
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
Family SAP
Protein Properties Length: 321aa    MW: 35760.7 Da    PI: 6.3135
Description SAP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.supercontig_211.22genomeASGPBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SAP505.23.4e-1542320132455
                           SAP 132 yvtlqfdpadvdedndadalsCrclalsdkylaaGfadGavrlfdletrlhvstflpqhrdrlGrfsravsGivisdsrlv 212
                                   +vtl++d++d+d+   ++ l+Crclalsd yla+GfadG+vr+fdl+t++h++tf++qh +r+GrfsravsGi+i+ srlv
  evm.model.supercontig_211.22   2 HVTLHYDQSDIDD---SEGLMCRCLALSDLYLACGFADGTVRIFDLATHRHINTFRSQHPHRFGRFSRAVSGIFITGSRLV 79 
                                   89*******9988...478************************************************************** PP

                           SAP 213 fatldGdihvavidgagaaaarrallGdvvndGalvdfaGsgrWwvGlyaGvpGrafhiWdaeteelvfvGGsltdPeavm 293
                                   fatldG i+v vi+g  + ++r a++GdvvndGalvdfaGsgrWwvGlyaGvpGrafhiWda+teelvfvGG+ltdPe+vm
  evm.model.supercontig_211.22  80 FATLDGYIYVVVING--SNQPRPAHMGDVVNDGALVDFAGSGRWWVGLYAGVPGRAFHIWDAHTEELVFVGGTLTDPESVM 158
                                   **************9..779************************************************************* PP

                           SAP 294 GWhmlteltelvGrvrvteretavaCtslrlvvfdlrnqgvvlreeeerrGlivssldasneayvvvdsrGvatvrrvenl 374
                                   GWhml elte+vGrvrvt++e+avaCt+lr +vfdlr+q vv r++++rrG+i +++d++neayvvvdsrG a+vr+v++l
  evm.model.supercontig_211.22 159 GWHMLIELTEFVGRVRVTSQESAVACTRLREIVFDLREQVVVRRDKQHRRGVIATTVDVNNEAYVVVDSRGLAIVRQVDSL 239
                                   ********************************************************************************* PP

                           SAP 375 eevcrfrvrg.aqrgvlgCvnggyalvyaggvlrvWeiekkegylyslrervgevnalvaddrhvavsssdgtihlldfga 454
                                   e+vcrfrv g aq++++gC+n gyal++ +g++ vWei++ + yly++rer++ vn++v+d+rh+a+  +d++ihl+dfga
  evm.model.supercontig_211.22 240 EQVCRFRVPGaAQGNIMGCMNSGYALICVAGIISVWEIKQGG-YLYNFRERMEGVNTIVVDERHMAALDNDNIIHLWDFGA 319
                                   *********999***************************966.*************************************9 PP

                           SAP 455 q 455
                                   q
  evm.model.supercontig_211.22 320 Q 320
                                   7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.130.10.102.8E-152190IPR015943WD40/YVTN repeat-like-containing domain
SuperFamilySSF509982.9E-1821156IPR011047Quinoprotein alcohol dehydrogenase-like superfamily
Gene3DG3DSA:2.130.10.102.8E-15193317IPR015943WD40/YVTN repeat-like-containing domain
SuperFamilySSF509982.9E-18203318IPR011047Quinoprotein alcohol dehydrogenase-like superfamily
PROSITE patternPS006780303317IPR019775WD40 repeat, conserved site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009554Biological Processmegasporogenesis
GO:0009908Biological Processflower development
GO:0030163Biological Processprotein catabolic process
GO:0046622Biological Processpositive regulation of organ growth
GO:0005634Cellular Componentnucleus
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    Send to blast
MHVTLHYDQS DIDDSEGLMC RCLALSDLYL ACGFADGTVR IFDLATHRHI NTFRSQHPHR  60
FGRFSRAVSG IFITGSRLVF ATLDGYIYVV VINGSNQPRP AHMGDVVNDG ALVDFAGSGR  120
WWVGLYAGVP GRAFHIWDAH TEELVFVGGT LTDPESVMGW HMLIELTEFV GRVRVTSQES  180
AVACTRLREI VFDLREQVVV RRDKQHRRGV IATTVDVNNE AYVVVDSRGL AIVRQVDSLE  240
QVCRFRVPGA AQGNIMGCMN SGYALICVAG IISVWEIKQG GYLYNFRERM EGVNTIVVDE  300
RHMAALDNDN IIHLWDFGAQ *
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in the specification of floral identity. Acts as A class cadastral protein by repressing the C class floral homeotic gene AGAMOUS in the external flower organs in association with APETALA2 and other repressors. Is required to maintain floral meristem identity in concert with AGAMOUS. Interacts also with APETALA2 to ensure the normal development of ovule.
Cis-element ? help Back to Top
SourceLink
PlantRegMapevm.model.supercontig_211.22
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021887129.10.0transcriptional regulator STERILE APETALA
SwissprotQ9FKH11e-133SAP_ARATH; Transcriptional regulator STERILE APETALA
TrEMBLA0A498J5W41e-144A0A498J5W4_MALDO; Uncharacterized protein
STRINGevm.model.supercontig_211.220.0(Carica papaya)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM110182634
Representative plantOGRP9756912
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35770.11e-135SAP family protein
Publications ? help Back to Top
  1. Li N, et al.
    STERILE APETALA modulates the stability of a repressor protein complex to control organ size in Arabidopsis thaliana.
    PLoS Genet., 2018. 14(2): p. e1007218
    [PMID:29401459]