PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.supercontig_211.21

Organism

Carica papaya

Taxonomic ID

3649

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica

Family

SAP

Protein Properties

Length: 93aa MW: 9506.38 Da PI: 9.3406

Description

SAP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.supercontig_211.21	genome	ASGPB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SAP	102.8	3.8e-32	1	83	1	82
SAP 1 mssss.ssssseseegseggeggdassgesegpsssrqraanevwpePflealatqvaidasrslGrlaaasalanvfqvcst 82 ms+ss sssss+s++g+ g ++ +g++egpsssr+ra nevwpePflealatqvaidasrs+Grlaaa+alanvfqv s+ evm.model.supercontig_211.21 1 MSASSsSSSSSSSQDGNGGAYVPGRRGGDFEGPSSSRRRALNEVWPEPFLEALATQVAIDASRSSGRLAAAPALANVFQVPSS 83 565540445556677777777778888*****************************************************886 PP

Sequence ? help Back to Top
Protein Sequence Length: 93 aa Download sequence Send to blast
MSASSSSSSS SSSQDGNGGA YVPGRRGGDF EGPSSSRRRA LNEVWPEPFL EALATQVAID 60 ASRSSGRLAA APALANVFQV PSSQSFIFVP RS*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional regulator involved in the specification of floral identity. Acts as A class cadastral protein by repressing the C class floral homeotic gene AGAMOUS in the external flower organs in association with APETALA2 and other repressors. Is required to maintain floral meristem identity in concert with AGAMOUS. Interacts also with APETALA2 to ensure the normal development of ovule.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	evm.model.supercontig_211.21

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_021887129.1	7e-40	transcriptional regulator STERILE APETALA
Swissprot	Q9FKH1	8e-11	SAP_ARATH; Transcriptional regulator STERILE APETALA
TrEMBL	A0A251Q2U8	3e-28	A0A251Q2U8_PRUPE; Uncharacterized protein
TrEMBL	A0A314ZN71	1e-30	A0A314ZN71_PRUYE; Uncharacterized protein
STRING	evm.model.supercontig_211.21	9e-57	(Carica papaya)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM24056	4	4
Representative plant	OGRP18039	2	2

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G35770.1	4e-13	SAP family protein

Link Out ? help Back to Top
Phytozome	evm.model.supercontig_211.21

Publications ? help Back to Top
Li N, et al. STERILE APETALA modulates the stability of a repressor protein complex to control organ size in Arabidopsis thaliana. PLoS Genet., 2018. 14(2): p. e1007218 [PMID:29401459]