 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
evm.model.supercontig_21.35 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
|
| Family |
GATA |
| Protein Properties |
Length: 182aa MW: 19506.4 Da PI: 4.6622 |
| Description |
GATA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| evm.model.supercontig_21.35 | genome | ASGPB | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GATA | 48.7 | 1.1e-15 | 41 | 77 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35
C++Cg+ + Tp +Rrgp g++tLCnaCGl+++ kg+
evm.model.supercontig_21.35 41 CQHCGVGEnnTPAMRRGPAGPRTLCNACGLMWANKGT 77
****998888************************997 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0008270 | Molecular Function | zinc ion binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 182 aa
Download sequence Send
to blast |
MHRKNGQFAS LKESSGGSSW DSTQSCLHDG TPRPETVIRR CQHCGVGENN TPAMRRGPAG 60
PRTLCNACGL MWANKGTLRD LSKGGRNLSI DQNEPETPVD VKPSIMEGEF SANPDQHGSP 120
EDLSKALTER PSKDLHGAAN EVTNSLPMTI VHSSADDDEQ EPLVELANPS DTDIDIPSSF 180
D*
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. {ECO:0000250, ECO:0000269|PubMed:14966217}. |
