PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.supercontig_21.207
Organism
Carica papaya
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
Family bZIP
Protein Properties Length: 322aa    MW: 35457.9 Da    PI: 9.7998
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.supercontig_21.207genomeASGPBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_144.92.4e-14239299362
                                   XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHHHHHHH CS
                        bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL.kkeleelkkevaklkse 62 
                                   + +r+rr++kNRe+A rsR+RK+a++ eLe  +  Le+eN++L k+++e+ k+ +++l  +
  evm.model.supercontig_21.207 239 AQQRQRRMIKNRESAARSRERKQAYQVELESLAVRLEEENERLlKEKAERTKERYKQLMEK 299
                                   679**************************************97256788888888888665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1708.5E-12234297No hitNo description
SMARTSM003389.3E-10237301IPR004827Basic-leucine zipper domain
PfamPF001702.5E-12239298IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.841239291IPR004827Basic-leucine zipper domain
CDDcd147071.77E-16241287No hitNo description
SuperFamilySSF579597.03E-9241292No hitNo description
PROSITE patternPS000360244259IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    Send to blast
MASSKVMPSS DSRNSDLSRR SSSSASSSSA NPQHQYQYQQ LSSSEQTKRS RSQNKSKFAS  60
TMTVDGILRD VYDANPPTES TLLDASITLI EAPAPAITAA AIDINRGQNQ SQNGSGPLAP  120
KSVDDVWREI VSGERKEMKE EVPDEMMTLE DFLAKAGAVE AVAEKKEEMD VKLQPERLSG  180
GVYAFDPVPP SPFQVEGSII GFANGVEVIG AGGSAASAVS GGGRGKRARL VLEPLDKAAQ  240
QRQRRMIKNR ESAARSRERK QAYQVELESL AVRLEEENER LLKEKAERTK ERYKQLMEKV  300
VPVIEKRKPP RVLRRVRSLE W*
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box motif (5'-CCACGTGG-3') of the rbcS-1A gene promoter. G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. {ECO:0000269|PubMed:8146148}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapevm.model.supercontig_21.207
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021903452.10.0G-box-binding factor 4-like
SwissprotP427779e-64GBF4_ARATH; G-box-binding factor 4
TrEMBLV4SJ331e-116V4SJ33_9ROSI; Uncharacterized protein
STRINGevm.model.supercontig_21.2070.0(Carica papaya)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM38522855
Representative plantOGRP8662715
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44080.11e-46bZIP family protein