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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
evm.model.supercontig_2011.1 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
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| Family |
WRKY |
| Protein Properties |
Length: 471aa MW: 50964.2 Da PI: 4.6605 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| evm.model.supercontig_2011.1 | genome | ASGPB | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 97.7 | 7.8e-31 | 221 | 279 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+
evm.model.supercontig_2011.1 221 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 279
699************************998****************************7 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 471 aa
Download sequence Send
to blast |
MEDYQGDLTD IFRAISHGVN TNIPSHDHDH DHNWFVSDNP LMDFPSSTHI LADNTSFGDP 60
FLNMRDPLLL QHPVPATAPA PAPASDYFST IVEDASFSGG STSTSSSVNL GQSILEDEMK 120
GSCSVFSRIQ ISSCSDVGSN QMAEVIAGGS PTGIKPAATG GGEMNNVNVK SCLVDNTTSS 180
LQISSPRNLG IKRRKSQVKK VVCIPAPAAA NSRSSGEVVP SDLWAWRKYG QKPIKGSPYP 240
RGYYRCSSSK GCSARKQVER SRTDPNMLVI TYTSEHNHPW PTQRNALAGS TRSQPSKTNN 300
SKTSSSSSSP PENNKQLDQI SSSTNDLITS SPVNPGGGGG SCSATTNTTT TACVKEEFEM 360
DDDDREISQH GDQDDQTFND KSYKPALLPD HHTHQAGDYL VGLDELESDP LNLLLSQGFN 420
NDDDDDDVDD PQKDNKNNKT VVDPFSDLFD WAVDSNTNNN RTCFGQPNNT X
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