 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
evm.model.supercontig_20.16 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
|
Family |
GATA |
Protein Properties |
Length: 335aa MW: 37589 Da PI: 9.2669 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
evm.model.supercontig_20.16 | genome | ASGPB | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 51.2 | 1.7e-16 | 231 | 267 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35
C++Cg+++ Tp +Rrgp g+++LCnaCGl+++ kg+
evm.model.supercontig_20.16 231 CQHCGVSEkfTPAMRRGPAGPRSLCNACGLMWANKGT 267
**********************************997 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0005515 | Molecular Function | protein binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 335 aa
Download sequence Send
to blast |
MEMVNPQPLQ ARSFGGKGYG LAQIPMQIDK DELDGRQIDT MNGVEETGVS SVNYGDGAVA 60 RTNRTSELTV AFEGEVYVFP AVTPQKDSLV MLRNFKINCE HQQHSMPPCV AHDLSQSNPW 120 VQAVLLLLGG ADTPTSVPIT DFLLQQNIRV VGEASQDSKL SKRIASLVKF REKRKERCFE 180 KKIRYSCRKE VAQRMHRKNG QFASLVECHD IAAGNWDPNV RTPSESCSGR CQHCGVSEKF 240 TPAMRRGPAG PRSLCNACGL MWANKGTLRD LTKNGRNISF NQSDLLFYKG NRLFTNVPRG 300 YCQEKRRAQV LENSKELYVY EAFFIYKEVL VKPK*
|