 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
evm.model.supercontig_2.277 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
|
Family |
ERF |
Protein Properties |
Length: 264aa MW: 29214.6 Da PI: 5.8415 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
evm.model.supercontig_2.277 | genome | ASGPB | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 64.5 | 2.2e-20 | 117 | 166 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+++GVr+++ +g+W+AeIrdp + rkr++lg+f taeeAa+ +++a++k++g
evm.model.supercontig_2.277 117 KFRGVRQRP-WGKWAAEIRDPAQ---RKRIWLGTFNTAEEAAAVYDEAALKFKG 166
89*******.**********943...5************************987 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 264 aa
Download sequence Send
to blast |
MVSIQSTLKL SSRVFTTNKL LHDPPADAKV RRRRVQIILT DADATDSSSE DEEERHGFLR 60 RVKRQVQVIT FDSSSTPDPH PPRSPTPLPA PTTLPKQKSP RRRPSRVTKS DVSRGQKFRG 120 VRQRPWGKWA AEIRDPAQRK RIWLGTFNTA EEAAAVYDEA ALKFKGSDAV TNFPNPSVTE 180 LTAVDSQKDG FDSSSTATSS PTSVLRYEEI TPFDGLNYCD VDTFGFGIDA ALSVPDFMFS 240 GKSFAEEEFG ELDVDDFLVD AVA*
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | KM453702 | 0.0 | KM453702.1 Carica papaya AP2/ERF transcription factor ERF5 mRNA, complete cds. |