 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
evm.model.supercontig_2.20 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
|
| Family |
GATA |
| Protein Properties |
Length: 126aa MW: 14165.4 Da PI: 10.5861 |
| Description |
GATA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| evm.model.supercontig_2.20 | genome | ASGPB | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GATA | 52.5 | 6.6e-17 | 7 | 40 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
C++Cg+ +TplWR gp ++ LCnaCG +yr++g
evm.model.supercontig_2.20 7 CRHCGVESTPLWRDGPLEKPVLCNACGSRYRLRG 40
****************99999**********998 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0008270 | Molecular Function | zinc ion binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 126 aa
Download sequence Send
to blast |
MMRKGPCRHC GVESTPLWRD GPLEKPVLCN ACGSRYRLRG AESLINYVPK QVQLNLTKMK 60
RKPKKSYRNT KKVKPSPQQV VVKTEPIEID DNSFYVNPPS LPQLNPATKQ ISNQITTNFQ 120
PSQTG*
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