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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
evm.model.supercontig_192.2 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
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Family |
Trihelix |
Protein Properties |
Length: 328aa MW: 37274.1 Da PI: 8.6891 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
evm.model.supercontig_192.2 | genome | ASGPB | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 55.9 | 1.1e-17 | 18 | 105 | 2 | 83 |
trihelix 2 WtkqevlaLiearremeerlrrg.........klkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtse 74
Wt +e+++Liea+r eer ++ k+++ +W++v ++++++g+ rs++qC++kw+nl ++ykk++e e+k + +
evm.model.supercontig_192.2 18 WTVSETMVLIEAKRMEEERRMKRvgdvgegrnKRAELRWKWVEDYCWRKGCLRSQNQCNDKWDNLMRDYKKVREYERKISRD 99
*************9777766642223333333799*******************************************9644 PP
trihelix 75 ssstcpyfd 83
++ +
evm.model.supercontig_192.2 100 GEE---SYW 105
442...233 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 328 aa
Download sequence Send
to blast |
MAEQGGNSSM TEYRKGNWTV SETMVLIEAK RMEEERRMKR VGDVGEGRNK RAELRWKWVE 60 DYCWRKGCLR SQNQCNDKWD NLMRDYKKVR EYERKISRDG EESYWKMEKG ERKAKNLPSN 120 MLAQIYEGLV EVVERRGHDN INTNPSLGYM GMEKAAHVMT SSNVQTPMLI TSPLLEHQVS 180 TPLMPAVLPL PPPLVLPQPP MPQPQPSPPS HSQPVDCDTS EDSETSGAKR RRRSRRDYNG 240 GGSSSGEEVG NAIRKSASII AEALEACEER EERRHREVVS LHERRLKIEE SNTEINRQGI 300 NGLVDAINKL ANSIMALASH KNHSPPK*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 229 | 236 | RRRRSRRD |