 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
evm.model.supercontig_19.45 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
|
Family |
WRKY |
Protein Properties |
Length: 333aa MW: 36970.5 Da PI: 6.8657 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
evm.model.supercontig_19.45 | genome | ASGPB | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 90 | 2e-28 | 166 | 225 | 2 | 58 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58
dD ++WrKYGqKe+ gs+fpr+YYrCt++ +Cp+kk+v+r ++dp ++ +tY+g+H +
evm.model.supercontig_19.45 166 DDNFSWRKYGQKEILGSRFPRAYYRCTHQklyNCPAKKQVQRLDDDPYMFLVTYRGSHSC 225
8****************************999**************************98 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 333 aa
Download sequence Send
to blast |
MEETISLIFH GLKKVKELEL NLPNYLANQP PHLLSSSLEE IITIFVEAKE RLVTSHESSS 60 QRVAMQNIDA SLQEWVIRSG ETKLLGGKAG EVSDQIMCRK DLDQGCSSTP FRNSNVNQAM 120 EVSDSGKLPI TCSSLQRPRR RRQDEEDRRT VRVAAPRMGN TDIPPDDNFS WRKYGQKEIL 180 GSRFPRAYYR CTHQKLYNCP AKKQVQRLDD DPYMFLVTYR GSHSCYTSAA AVPTTSTEMI 240 IATTTTTGIT TTDQSNVVTT STSGLSLNPL PLDRWLSVQV SVGGSSLSHR YDKETEYAAG 300 VVDMADAMFN SGSSGGNNTM EFIFPSQHPP QS*
|
3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
6ir8_A | 1e-18 | 166 | 225 | 9 | 68 | OsWRKY45 |