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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
evm.model.supercontig_188.14 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
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Family |
Dof |
Protein Properties |
Length: 333aa MW: 35387.5 Da PI: 9.0247 |
Description |
Dof family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
evm.model.supercontig_188.14 | genome | ASGPB | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-Dof | 123.8 | 5.7e-39 | 79 | 138 | 3 | 62 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
e+alkcprC+stntkfCy+nnyslsqPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+s+
evm.model.supercontig_188.14 79 ETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSK 138
7789*****************************************************975 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 333 aa
Download sequence Send
to blast |
MVFTSIPAYL DPVNWQQQQV ANHQAGGTSG AGIHLLPPPP PPPPLPPAVP QPHGEGGAGS 60 IRPGSMADRA RLANIPMPET ALKCPRCEST NTKFCYFNNY SLSQPRHFCK TCRRYWTRGG 120 ALRNVPVGGG CRRNKRSKGS NSSKSSSAVS GDRPTGSGST ASMSCNSNEM IGLGTPLPQL 180 RFMAPLHHLT GHDDLGLSYG PVSAPLVGGT SELVPGTSLL LDQWRLQQFP LLGGFDSSYG 240 LYPFEASSYG GGAGQIRPKL STTGMATQLA SVKMEDSNNN NNSNQQEMNL SRQFLGVNPA 300 AGYDHIHHYW NNAATSWSDV SSFSSSSTSN PL*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence (By similarity). Binds to 5'-TAAAGT-3' motif in REV promoter to triggers its transcription, thus regulating adaxial-abaxial polarity and influencing leaf axial patterning in an auxin transport- and response-dependent manner (e.g. IAA6 and IAA19 genes expression) (PubMed:20807212). Probably involved in early processes for vascular development (PubMed:17583520). The PEAR proteins (e.g. DOF2.4, DOF5.1, DOF3.2, DOF1.1, DOF5.6 and DOF5.3) activate gene expression that promotes radial growth of protophloem sieve elements (PubMed:30626969). {ECO:0000250|UniProtKB:Q9M2U1, ECO:0000269|PubMed:17583520, ECO:0000269|PubMed:20807212, ECO:0000269|PubMed:30626969}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By cytokinin in procambium. {ECO:0000269|PubMed:30626969}. |