 |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
evm.model.supercontig_18.56 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
|
Family |
WRKY |
Protein Properties |
Length: 269aa MW: 30279.2 Da PI: 4.5948 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
evm.model.supercontig_18.56 | genome | ASGPB | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 94.6 | 7.1e-30 | 58 | 116 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+D ++WrKYGqK++kgs++pr+YYrC+++ gC++kk+ver+++d ++++itY+++Hnh+
evm.model.supercontig_18.56 58 SDLWSWRKYGQKPIKGSPYPRGYYRCSTSkGCSAKKQVERCRTDSSFLIITYTSSHNHP 116
699***********************9988****************************7 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 269 aa
Download sequence Send
to blast |
MDETTDHRGL SAKLDSEASE LESPATPASK RRKLVEKHVV RVKTGENVGK LKNEGPPSDL 60 WSWRKYGQKP IKGSPYPRGY YRCSTSKGCS AKKQVERCRT DSSFLIITYT SSHNHPGPDI 120 DMTNTDPKPE TQTQLPTRED DPPTPKQEPT TTRDDDQDQE THDDDHHQYH SFQYLQPTLN 180 ESEDGIIINQ DDDPIINPNE KLDFLLVEEP LIPSCSHLLN LSSSTEKSEE NDFFDELEEL 240 PCTSSSSGFR SFMGIGNVFD ERIPVVPS*
|
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KU144581 | 2e-46 | KU144581.1 Panax ginseng WRKY8 transcription factor mRNA, complete cds. |