 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
evm.model.supercontig_148.5 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
|
| Family |
Trihelix |
| Protein Properties |
Length: 330aa MW: 37160.8 Da PI: 5.5815 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| evm.model.supercontig_148.5 | genome | ASGPB | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 34.2 | 6.8e-11 | 50 | 119 | 2 | 71 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr 71
Wt + l L++ +e + +++ + ++W+ +s+++ + + rs +qC+ kw +l +y +ik++e+
evm.model.supercontig_148.5 50 WTVEDMLILVNEIAAVEADCSNALSTYQRWKIISENCTALDVPRSLNQCRRKWGSLLVEYNQIKQWESLS 119
999****************************************************************974 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 330 aa
Download sequence Send
to blast |
MEATQMPDET ESHQTPQEKN VRDGQMEQGD NSQVRVSGSR CTRSQVAPDW TVEDMLILVN 60
EIAAVEADCS NALSTYQRWK IISENCTALD VPRSLNQCRR KWGSLLVEYN QIKQWESLSS 120
GSYWSLGIGS RKQFGLPDYF DYELFKAIDN VVRAQEDKAD TDPESDPDAE TDTLEIVAQL 180
GSNGPTRRLN IMEQKPHEIR KEDTKLKWCT EKSHPGRKPQ KSSAKKKLLK NDMKGKRTIS 240
IEAKEQTVAA FTEAKEQSLA AKLQESAELI HAIVKENLSE KAKRVNSTVK NAEEFKTDVI 300
RRQGNRLIAC LGVMIESLNQ ICDVVQNGE*
|
| Best hit in Arabidopsis thaliana ? help
Back to Top |
| Hit ID |
E-value |
Description |
| AT4G31270.1 | 4e-69 | sequence-specific DNA binding transcription factors |
