PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.supercontig_14.230
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
Family G2-like
Protein Properties Length: 75aa    MW: 8766.49 Da    PI: 5.765
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.supercontig_14.230genomeASGPBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like32.81.5e-106352756
                       G2-like 27 AtPktilelmkvkgLtlehvkSHLQkYRla 56
                                  +t k+i+e+++ +gLt e+vkSH Q+YRl+
  evm.model.supercontig_14.230  6 TTSKQIKEIIQAEGLTSEQVKSHHQRYRLH 35
                                  689*************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.9E-8637IPR009057Homeodomain-like
TIGRFAMsTIGR015572.5E-8735IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 75 aa     Download sequence    Send to blast
MIRLTTTSKQ IKEIIQAEGL TSEQVKSHHQ RYRLHHDHVR QFCHHDVIQS NFTDDDDDDD  60
NDANQHVVKA FEEN*
Cis-element ? help Back to Top
SourceLink
PlantRegMapevm.model.supercontig_14.230
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021905360.13e-20uncharacterized protein LOC110820240
STRINGevm.model.supercontig_14.2305e-47(Carica papaya)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM15410716
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G25790.11e-07G2-like family protein