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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
evm.model.supercontig_137.19 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
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Family |
Trihelix |
Protein Properties |
Length: 344aa MW: 40236.6 Da PI: 9.3376 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
evm.model.supercontig_137.19 | genome | ASGPB | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 73.5 | 3.7e-23 | 50 | 112 | 1 | 63 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykk 63
+W +qe+++ i++r e+e++++ +k++k+lWe vs+kmrerg++r+p qCk+kw+nl +ryk+
evm.model.supercontig_137.19 50 QWGHQETKDFIAIRAELEKDFKVAKRNKTLWEIVSSKMRERGYRRTPDQCKCKWKNLVNRYKA 112
7************************************************************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 344 aa
Download sequence Send
to blast |
MAYREEEVMF GGGDNEALGG ISGMASSLLS PAETASGRGR EERAPQNQPQ WGHQETKDFI 60 AIRAELEKDF KVAKRNKTLW EIVSSKMRER GYRRTPDQCK CKWKNLVNRY KASFSLSQMY 120 NICVYKLRLL LIKKAFHTIN KLEKDLNRGK ETSDLDNGRQ CPFFEELHAV FIERAKSMQR 180 LLVGSGVGCD QAKKKMKRIS GDRSSDEFSE EDDDNDDESE AARSKVRKRK AERNVLEKSS 240 KAVNAGNASS NVSSDIHEML KEFFQQQQRM EMQWREMMER RALERQLFEQ EWRQSMEKLE 300 KERLMVELAW REKEEQRRMR EESRAERRDA LLTTLLNKLI NEN*
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