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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
evm.model.supercontig_136.56 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
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Family |
CO-like |
Protein Properties |
Length: 444aa MW: 47983.5 Da PI: 6.6736 |
Description |
CO-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
evm.model.supercontig_136.56 | genome | ASGPB | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-B_box | 18.2 | 5.1e-06 | 4 | 44 | 5 | 39 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39
+C+ +e+++ +C+++ +lC +C + H+ H++
evm.model.supercontig_136.56 4 MCDFCEDQRSMVYCRSDAACLCLSCDRNVHSAnalskrHSR 44
7*****************************65677777776 PP
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2 | zf-B_box | 21.6 | 4.5e-07 | 46 | 89 | 4 | 41 |
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41
+C++++++++ C + + lC++C H + H++++
evm.model.supercontig_136.56 46 LICERCNSQPALVRCAEEKASLCQNCDWVVHGNstsastHKRQT 89
68*************************99995588888898776 PP
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3 | CCT | 61.8 | 2.1e-21 | 386 | 429 | 1 | 44 |
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44
R +a++RYkeK+ktRkF+K++rY+sRKa+A+ R RvKGrFvk+
evm.model.supercontig_136.56 386 RSNAVMRYKEKKKTRKFDKRVRYASRKARADVRRRVKGRFVKAG 429
899**************************************975 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 444 aa
Download sequence Send
to blast |
MGFMCDFCED QRSMVYCRSD AACLCLSCDR NVHSANALSK RHSRTLICER CNSQPALVRC 60 AEEKASLCQN CDWVVHGNST SASTHKRQTI SCYSGCPSAA ELSSIWSFVL ELPSTGESTC 120 EQELGLMSIT ENRAKNSWGP SDNPISQNAG VVDGKDVRNS DKSGHLIGSS SAPGPNSAPR 180 NLDQLLGSSN ATLAKLQYPH FATEDKREFK GGSDVRNKIV PYPKSCSPGT KGLGFCEDDL 240 YGDFLMDEVD LNLENYEELF GVTLNHSQEL FENGGLDSLF GTKDISAAES NCPGAVAAEG 300 SSVGLVSAMQ PACSNAASAD SVMSTKTEPI VRFTARQGHS NLSFSGLTGE SSGGDYQDCG 360 ASSMLLMGEP PWLPSCPEGS LQSVSRSNAV MRYKEKKKTR KFDKRVRYAS RKARADVRRR 420 VKGRFVKAGD AYDYDPLNQT RSC*
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