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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
evm.model.supercontig_1332.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
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Family |
CO-like |
Protein Properties |
Length: 342aa MW: 37099.3 Da PI: 6.5024 |
Description |
CO-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
evm.model.supercontig_1332.1 | genome | ASGPB | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-B_box | 26.5 | 1.3e-08 | 4 | 36 | 4 | 36 |
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg 36
+ C+ +++ ++lfC+ ++ +lC +C ++ H
evm.model.supercontig_1332.1 4 KLCDSCKSATATLFCRADSAFLCVNCDSKVHAA 36
58***************************9954 PP
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2 | zf-B_box | 27.7 | 5.5e-09 | 46 | 91 | 3 | 42 |
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42
++C+ +e+ +++ C+ + lC +C +H+ H++vp+
evm.model.supercontig_1332.1 46 VWVCEVCEQAPAHVTCKADAAALCVTCDRDIHSAnplarrHERVPV 91
689*****************************66899999*99986 PP
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3 | CCT | 69.3 | 9.6e-24 | 278 | 321 | 1 | 44 |
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44
Rea++lRY+eKrk+RkFeK+irY+sRKa+Ae RpR+KGrF+k++
evm.model.supercontig_1332.1 278 REARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRT 321
9*****************************************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 342 aa
Download sequence Send
to blast |
MASKLCDSCK SATATLFCRA DSAFLCVNCD SKVHAANKLA SRHARVWVCE VCEQAPAHVT 60 CKADAAALCV TCDRDIHSAN PLARRHERVP VTPFYDSVAS APGAVKPNAA ATAVNFLDDR 120 YFSDVDGDAD VSREEAEAAS WLLPNPNSKA VAASPDLNTG QFMFSDMDPY LDLDYGPVDP 180 KLEAQEQNSS GTDGVVPVQS RSVQAPLVNE HCFDLDFGAS KYFPYGYNGH SLSHSVSSSS 240 VDVGVVPDGG SMADITNPYS RGAESGNQTA AQLSSADREA RVLRYREKRK NRKFEKTIRY 300 ASRKAYAEMR PRIKGRFAKR TDIEVDADRN SIYGFGIVPT F*
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