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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
evm.model.supercontig_131.71 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
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Family |
TCP |
Protein Properties |
Length: 532aa MW: 59940.3 Da PI: 6.7795 |
Description |
TCP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
evm.model.supercontig_131.71 | genome | ASGPB | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | TCP | 108.2 | 1.3e-33 | 169 | 294 | 2 | 89 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt................s 66
+g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak+ai++l+++
evm.model.supercontig_131.71 169 TGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDKLAELppwnpetlnittntttA 249
79**************************************************************99888888776533221 PP
TCP 67 sssasec.eaesssssasnsssg...........................k 89
+ +++s++ +++++++
evm.model.supercontig_131.71 250 ------TkAPNTSKNHQEQPRIDdreyqfqlhhggttammdnvaasaasgG 294
......222333333333333334444444444444455554444433331 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 532 aa
Download sequence Send
to blast |
MELETLNGRG FWERQQEEKY YQEYIKVLTL DPQRNHYPHH HHLQQHHQQQ RQQEEEEEEE 60 EEEEEEEEEE EEKESQRKHL LYILNTTQAP QNQLLYGGEE LDIPPQPPKK RSYRPSISPS 120 STSFAQQATQ YARKMENSHH QAATSSRLGL RNAGGEIVEV QGGHIVRSTG RKDRHSKVCT 180 AKGPRDRRVR LSAHTAIQFY DVQDRLGYDR PSKAVDWLIK KAKAAIDKLA ELPPWNPETL 240 NITTNTTTAT KAPNTSKNHQ EQPRIDDREY QFQLHHGGTT AMMDNVAASA ASGGSSGGSS 300 GRRTTPLMGN EVQNLQHQQQ TQMSENPDTG SSFLPPSLDS DAIADTIKSF FPMGASTEPP 360 SSSIQFQSYP PDLLSRTSSQ SQDLRLSLQS FQEPMLLQHQ AQTQAHHTDS LGFAFQHGFR 420 AKKRSTTASP TSRPLPPLIL AIDGTINIRS KSFPFHQSTY LLELLFEKRT SVFSVDLIIS 480 STGADPVGGA ESISSWSTIK YVKVNLAGGT MKGELDEHNY KQKLTYWKKN T*
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Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT1G53230.1 | 1e-40 | TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 |