 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
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TF ID |
evm.model.supercontig_13.247 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
|
Family |
MYB_related |
Protein Properties |
Length: 384aa MW: 42599.8 Da PI: 8.4528 |
Description |
MYB_related family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
evm.model.supercontig_13.247 | genome | ASGPB | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 29 | 2.5e-09 | 166 | 211 | 3 | 47 |
SS-HHH.HHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 3 rWTteE.dellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+W +eE + l++ + +++G+g+W I++++ k+Rt+ q+ s+ q+y
evm.model.supercontig_13.247 166 PWREEEgHRLFLAGLEKMGKGDWIGISKKFVKTRTRTQIASHAQNY 211
7888887999***********************************9 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 384 aa
Download sequence Send
to blast |
MVKESPRKCG RRWLYGHNSR TCKGNGGENS SFRLFGADTV ENKEPAIVKK SQSSGDLQHL 60 VGKHDATDCG YSSDSQINSK KRTQRKKEKQ REKNLRDEID EVNDSGLPAE LIWSWDFVEE 120 QLRLWKNGLT VNLSHVFGSY QDLAFGFLFS RIKSKLRKKI NSEGDPWREE EGHRLFLAGL 180 EKMGKGDWIG ISKKFVKTRT RTQIASHAQN YFHRLALEDK SKRRAIIFDI SLEQSEPNVE 240 DSSHGTPESL PQVNEGMPVM EAANAGSTPM QSATTVEVTQ QASDNPPIGV PTHFPLLALV 300 PASDVSDYRG NEGGRILMTS PSPFVAVMNY GIPTSYVQLA QKLTEPVPAT SVSSSTGSDP 360 LQLTLTRSQA THPNDVINMP DNK*
|
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KC777372 | 1e-144 | KC777372.1 Carica papaya PEI1-like (At5g07500-like), myb-like transcription factor family protein (At5g61620-like 1), myb-like transcription factor family protein (At5g61620-like 2), myb-like transcription factor family protein (At5g61620-like 3), oleosin-like (cpOLE4), and ethylene responsive element binding factor-like (At5g07580-like) genes, complete cds. |