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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
evm.model.supercontig_127.55 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
|
| Family |
G2-like |
| Protein Properties |
Length: 479aa MW: 51914.8 Da PI: 7.2879 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| evm.model.supercontig_127.55 | genome | ASGPB | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 101.3 | 6.3e-32 | 259 | 314 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56
k+r++W+p+LH+rFv+a++ LGGs++AtPk+i+elmkv+gLt+++vkSHLQkYRl+
evm.model.supercontig_127.55 259 KARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVEGLTNDEVKSHLQKYRLH 314
68****************************************************97 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009266 | Biological Process | response to temperature stimulus |
| GO:0009740 | Biological Process | gibberellic acid mediated signaling pathway |
| GO:0010452 | Biological Process | histone H3-K36 methylation |
| GO:0048579 | Biological Process | negative regulation of long-day photoperiodism, flowering |
| GO:1903507 | Biological Process | negative regulation of nucleic acid-templated transcription |
| GO:0005634 | Cellular Component | nucleus |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 479 aa
Download sequence Send
to blast |
MASPSELSLD CKPHSYSMLL KSFGDQTTAD HAQKLEEFLS RLEEERLKID AFKRELPLCM 60
QLLTNAVEAS RQQLQAYRAN QGPRPVLEEF IPLKNPSSES TEKLNTISDK ANWMTSAQLW 120
SQAGNETKPQ PTTIISSSLS PKETDIGFNV SPKLALDTKQ RNGGAFLPFS KERNSCPTPT 180
PVRAGLPELA LVSREKDGMD QDSKFSDQMG ESGMVRREST GKAGNGINEQ GKGPCNNNST 240
SEAQAGNNTA TNAAQTHRKA RRCWSPDLHR RFVNALQMLG GSQVATPKQI RELMKVEGLT 300
NDEVKSHLQK YRLHTRRPSP SPQATGAPAP QLVVLGGIWV PPEYATAHGG TPTLYGTHHH 360
PAAPHAPTHF CAPPPVPQEF YSSTSPAAAP PPALHHPTLH HQLLMYKAAS AQTHSSPESD 420
IRGAADRSES IEDGKSESSS WKGDSGGENG NSGDQRKGLA ALREDGEESN GSEITLKF*
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4r_A | 4e-14 | 259 | 312 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 4e-14 | 259 | 312 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 4e-14 | 259 | 312 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 4e-14 | 259 | 312 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor acting as a flowering repressor, directly repressing FT expression in a dosage-dependent manner in the leaf vasculature. {ECO:0000269|PubMed:25132385}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated by SVP. Down-regulated by high temperature and gibberellic acid treatment. Not regulated by photoperiod, circadian rhythm under long days or vernalization. {ECO:0000269|PubMed:25132385}. |
