 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
evm.model.supercontig_127.27 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
|
| Family |
WRKY |
| Protein Properties |
Length: 294aa MW: 33706.7 Da PI: 9.083 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| evm.model.supercontig_127.27 | genome | ASGPB | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 95.7 | 3.2e-30 | 114 | 173 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
++Dgy+WrKYGqK+ k+++ pr+Y+rC++a Cpvkkkv+rs ed ++++ tYegeHnh+
evm.model.supercontig_127.27 114 VKDGYQWRKYGQKVTKDNPSPRAYFRCSMApACPVKKKVQRSLEDSSILIATYEGEHNHD 173
58***************************99****************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 294 aa
Download sequence Send
to blast |
MDVVDSISRR KKALIGELEN LRKENESLKW LLEVLNSKYS MLEAQVKQTC SSNNNNNNNN 60
RRRRHHHKNT DEDQQQVVDC SYYEPNKRPR TQLQLQKPSQ IFVRTHPKDK TLSVKDGYQW 120
RKYGQKVTKD NPSPRAYFRC SMAPACPVKK KVQRSLEDSS ILIATYEGEH NHDIHGQNLY 180
LQGNSIDTNN PTSSLITNFP YPLRVNPFER CITLDLALSP AGSTQHHDHH HHQYAKPTQN 240
NSIPDDNDNN NLEMKTKSEE EMMESLTKDP NFILSLASAV ARSITQSPKS TAI*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 2ayd_A | 7e-22 | 114 | 174 | 14 | 73 | WRKY transcription factor 1 |
