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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
evm.model.supercontig_126.31 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
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Family |
Trihelix |
Protein Properties |
Length: 553aa MW: 62701.7 Da PI: 5.9435 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
evm.model.supercontig_126.31 | genome | ASGPB | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 94.9 | 7.7e-30 | 377 | 462 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpy 81
rW k ev aLie+r+++e+r+++ k+p Weevs+ m++ g++r++k+Ckekwen+nk+++k ke+ +++ s +s+tcpy
evm.model.supercontig_126.31 377 RWLKAEVEALIEVRSSLETRFQEPGVKAPVWEEVSSLMASMGYQRNAKRCKEKWENINKYFRKAKESGRSKLSLNSKTCPY 457
8******************************************************************************** PP
trihelix 82 fdqle 86
fd+l+
evm.model.supercontig_126.31 458 FDKLD 462
***98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 553 aa
Download sequence Send
to blast |
MQPSYGLPQT TPHQHQHEQT VPMDIGVCSS SLFSISNPLY QPQKQPQNLF QLLQQHHHHQ 60 LQPFQQQDPF FPLNFKLGLN DNATANKEAL LTQQFTSSFL QGAHSVAVVP PPWNPQEDSA 120 AIKEPIWKPL EKEVINSGNI ECNDNKEQEM EGKNGKKSAF REVDESSGRR KNLENKCRLF 180 GELEAIYSRA NIGELNNQTG SGSALTGQNS PTIQCSNNHC ENVDAGIAGA GVDPGSDISI 240 GREASLWKTQ KRKKKKKRNL REHLGSMTGF FEMLVKQVMD HQEGLQRKFM EAIEGIEKER 300 TRREDSWRRQ QVEKHNREAI ARAHEQAVAS NREAIIISYI EKITGQSLNL PCRNPPMLFQ 360 PEIKRPKEPV NADSNSRWLK AEVEALIEVR SSLETRFQEP GVKAPVWEEV SSLMASMGYQ 420 RNAKRCKEKW ENINKYFRKA KESGRSKLSL NSKTCPYFDK LDQLYFSTPL RRFTKSDDEE 480 AVRQGYSEVS DALVSGKESG NSEYGEMGSS KLNLDGIADE EESQEKENLN HEYGKDSEQE 540 DCRSDDDDDG EE*
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