 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
evm.model.supercontig_120.33 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
|
| Family |
G2-like |
| Protein Properties |
Length: 371aa MW: 41130.7 Da PI: 8.0119 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| evm.model.supercontig_120.33 | genome | ASGPB | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 100.6 | 1e-31 | 65 | 118 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
prlrWtp+LH rFv+ave+LGG+e+AtPk +l+ m++kgL+++hvkSHLQ+YR+
evm.model.supercontig_120.33 65 PRLRWTPDLHLRFVHAVERLGGQERATPKLVLQQMNIKGLSIAHVKSHLQMYRS 118
8****************************************************7 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 371 aa
Download sequence Send
to blast |
MEGSGGTQCS KTSHSNPNQG ESSEQSEEND DVCNKLRNGG SSSNSTVEEN EKKPMVRPYV 60
RSKMPRLRWT PDLHLRFVHA VERLGGQERA TPKLVLQQMN IKGLSIAHVK SHLQMYRSKK 120
MDEPGQAIAD NKYLVESGDG NIYNLSQLPM LKGYNQSQGS PFRYGESSWC NQESLTNTGS 180
CSSWGFINAF RPGSLVAGRI YGGHNIISNN SPCSIGSSLS NSHCASQTHE QYHLSTYTKS 240
WQSEYKANQS DQLNQPQAKM EDCKSIKGFI NGPSSLSGLN QYNTKENKTV KRKALACNLD 300
LDLSLRLTPT SLININHGRS RNLEVEDEDD NDLSLSLYSP SSVKLSRLKQ GVEEQNEEMA 360
RRASTLDLTI *
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4r_A | 2e-17 | 66 | 120 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 2e-17 | 66 | 120 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 2e-17 | 66 | 120 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 2e-17 | 66 | 120 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015037 | 3e-37 | AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari. |
