 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
evm.model.supercontig_12.196 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
|
| Family |
WRKY |
| Protein Properties |
Length: 423aa MW: 45705.8 Da PI: 8.1039 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| evm.model.supercontig_12.196 | genome | ASGPB | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 106.8 | 1.1e-33 | 238 | 296 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK+v+g+++prsYY+Ct agCpv+k+ver+++dpk+v++tYeg+Hnh+
evm.model.supercontig_12.196 238 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHD 296
59********************************************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009611 | Biological Process | response to wounding |
| GO:0009961 | Biological Process | response to 1-aminocyclopropane-1-carboxylic acid |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 423 aa
Download sequence Send
to blast |
MDDHVSAPQQ LQLRMSDTGD PAQKPAGFDG TGAGGARYKL MSPAKLPISR SSCITIPPGL 60
SPTSFLESPV LLSNVKAEPS PTTGSLTKPQ MPHASVGSSS YLATSFEERK SSSFEFRPPP 120
KSNMPQPSRR YSAGMIMSNQ KERSDKASSL AGRDDKSSMY GQVSHTGEPN GTPDLSPGAA 180
NDENGEGAVL NRINDEFDED DPFSKRRKMD GGIEVTPVVK PIREPRVVVQ TLSEVDILDD 240
GYRWRKYGQK VVRGNPNPRS YYKCTNAGCP VRKHVERASH DPKAVITTYE GKHNHDVPTA 300
RTSSHDTSGV ALNGASRLRP EENDAISLDL GVGISSGNDN RLSEQQQVHA ELIQGQTRAN 360
TAASFRLVPA VPLASYYGVV NSGLNSHMSR EPQTEVRSVE LQPLNHSSYP YPPNMGRILS 420
GP*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}. |
