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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.supercontig_1195.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
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Family | WRKY | ||||||||
Protein Properties | Length: 119aa MW: 13073.8 Da PI: 6.6242 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 30.7 | 6.5e-10 | 2 | 27 | 34 | 59 |
-EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 34 vkkkversaedpkvveitYegeHnhe 59 vkk+vers +dp++v++tYeg+Hnh+ evm.model.supercontig_1195.2 2 VKKRVERSFQDPSTVITTYEGQHNHQ 27 8************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00774 | 0.0044 | 1 | 28 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.7E-6 | 1 | 29 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 12.151 | 1 | 29 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 3.0E-8 | 2 | 29 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.4E-5 | 2 | 27 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 119 aa Download sequence Send to blast |
MVKKRVERSF QDPSTVITTY EGQHNHQCPA TLRGSAAGMF SPSLLTGSAL SVAPSFPQEL 60 LLTHLLPTPN SNTGNGEPSS MFYHQNFTPP LQHPQLQIPD QYDLLQDLLP AFIDKHHP* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | evm.model.supercontig_1195.2 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021894797.1 | 3e-81 | probable WRKY transcription factor 71 | ||||
TrEMBL | A0A067F4B5 | 2e-38 | A0A067F4B5_CITSI; Uncharacterized protein | ||||
TrEMBL | A0A2H5QUL4 | 2e-38 | A0A2H5QUL4_CITUN; Uncharacterized protein | ||||
TrEMBL | V4TKS7 | 2e-38 | V4TKS7_9ROSI; Uncharacterized protein | ||||
STRING | evm.model.supercontig_1195.2 | 1e-81 | (Carica papaya) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G29860.1 | 3e-15 | WRKY DNA-binding protein 71 |
Link Out ? help Back to Top | |
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Phytozome | evm.model.supercontig_1195.2 |