 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
evm.model.supercontig_117.75 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
|
| Family |
Trihelix |
| Protein Properties |
Length: 339aa MW: 39793.7 Da PI: 4.6412 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| evm.model.supercontig_117.75 | genome | ASGPB | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 56.1 | 9.7e-18 | 40 | 118 | 2 | 85 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyf 82
W+ +evlaL+++r++me+++ + We+vs+k +e gf+rs+++Ckek+e+ + ++ +i++++++ t+ + s ++
evm.model.supercontig_117.75 40 WSSDEVLALLRIRSSMENWFPEF-----SWEHVSRKFAELGFKRSAEKCKEKFEEESSYFNNINHNQNNYTKINGSYRVFS 115
********************998.....8**************************************99988777666666 PP
trihelix 83 dql 85
d+l
evm.model.supercontig_117.75 116 DDL 118
666 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 339 aa
Download sequence Send
to blast |
MVVGLDLEME GGIITSNIPT DHHHHHHHHH QLGDQDHQPW SSDEVLALLR IRSSMENWFP 60
EFSWEHVSRK FAELGFKRSA EKCKEKFEEE SSYFNNINHN QNNYTKINGS YRVFSDDLEE 120
LYTEHDDHVD DDNHQHVVNV ERNETVEEKP SEEEDKSPRQ DNLNDNYKDQ DDQTAEIKIN 180
PSGIDDDIKS RKRKREEEQK KKKIKEEEFE MFKGFCEEIV KNMMIQQEEM HNKLLEDMVK 240
RDEEKVAREE IWKKKEIERI NEELELRAQE QAISGTLVVP SPSGGGSEDL PTLRQKNSDS 300
PETLPPVTWQ DDSNVHPILH VPQSEKSVVQ IPSYDFDF*
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor that binds specific DNA sequence. {ECO:0000250}. |
