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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
evm.model.supercontig_116.48 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
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| Family |
GeBP |
| Protein Properties |
Length: 288aa MW: 32241.8 Da PI: 9.5212 |
| Description |
GeBP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| evm.model.supercontig_116.48 | genome | ASGPB | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF573 | 63.4 | 5.4e-20 | 44 | 135 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfsk 82
+++r+w++ Dei++L+Gl++ g s +d+ fy+ +++s+s +s sql++K+rrL+ Kf+ +++ + g +ps+ +
evm.model.supercontig_116.48 44 KSHRIWTDPDEISFLKGLLQS----GLSFPKDLPLFYRRFSSSMSKPYSYSQLSDKLRRLRGKFRLLSSRLSCGLQPSLLS 120
578****************87....*9999*************************************************** PP
DUF573 83 ehdqkifelskkiWg 97
+h + f ls ++W
evm.model.supercontig_116.48 121 PHHRALFRLSAQLWS 135
**************7 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 288 aa
Download sequence Send
to blast |
MDMESNPSLL KPSASKSKLP IKRKNPEPDP INSPLPAKKT PPFKSHRIWT DPDEISFLKG 60
LLQSGLSFPK DLPLFYRRFS SSMSKPYSYS QLSDKLRRLR GKFRLLSSRL SCGLQPSLLS 120
PHHRALFRLS AQLWSSDFAS SSPFDFRHPT PPPADDLIPT HTHAPIQFSF LPDVHRGSSD 180
PDHDADRDRA CDGKMSEMHV ECDLGHGDGG GGFVGAIARS ALNVFDECLK DVLAKQGLIC 240
LDNRKIQGGE TKDMETRWRE QRLAEVDVFR RRLRLVLDNS LNGSLIV*
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