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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
evm.model.supercontig_107.48 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
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Family |
MYB |
Protein Properties |
Length: 313aa MW: 35208.7 Da PI: 6.71 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
evm.model.supercontig_107.48 | genome | ASGPB | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 57.9 | 2.2e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+W++eEd llv+++k++G g+W+t ++ g+ R++k+c++rw +yl
evm.model.supercontig_107.48 14 KGAWSPEEDRLLVQYIKEHGHGSWRTLPKLAGLSRCGKSCRLRWTNYL 61
79********************************************97 PP
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2 | Myb_DNA-binding | 53.3 | 6.2e-17 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
rg++++eE+ +++++ +lG++ W++Ia++++ gRt++++k++w++
evm.model.supercontig_107.48 67 RGPFSPEEESAIIQLHYMLGNR-WAAIASHLP-GRTDNEIKNFWNTN 111
89********************.*********.***********986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 313 aa
Download sequence Send
to blast |
MGRTPCCDRE KLKKGAWSPE EDRLLVQYIK EHGHGSWRTL PKLAGLSRCG KSCRLRWTNY 60 LRPDIKRGPF SPEEESAIIQ LHYMLGNRWA AIASHLPGRT DNEIKNFWNT NLKKPLLAAK 120 DQTIVHSPST YEPGTLNSES PLTRHMIQWE SKGNRVEAEA RLSMESSSVA KAECDIFLKL 180 WNSEVGESFR KSLKPLEEND EACESLFSGK SLSKMSEPDS NLIVRARHTA AGTSIDSTDK 240 QYDRNKPNAE ILAGSDSIAS DHEFLDSSDT ELKMMFDLPG GSYIEFLQGK TDNFLSFVDL 300 QCDRKCNSLA FI*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that may play a role in flower development by repressing ANT (PubMed:19232308). Regulates the transition of meristem identity from vegetative growth to flowering. Acts downstream of LFY and upstream of AP1. Directly activates AP1 to promote floral fate. Together with LFY and AP1 may constitute a regulatory network that contributes to an abrupt and robust meristem identity transition (PubMed:21750030). {ECO:0000269|PubMed:19232308, ECO:0000269|PubMed:21750030}. |