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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
evm.model.supercontig_106.63 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
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| Family |
LBD |
| Protein Properties |
Length: 210aa MW: 22614.8 Da PI: 7.9691 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| evm.model.supercontig_106.63 | genome | ASGPB | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 96 | 4e-30 | 2 | 103 | 1 | 97 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGa 76
+C++C++lr++C+++C+l++++ p++q++++ +v+k+FG++ ++++++a+p+++r+++++sl++eA ra +Pv Ga
evm.model.supercontig_106.63 2 SCNGCRILRKGCSENCMLRQCLqwldsPQAQANATVFVAKFFGRAGLMSFISAVPQSQRPALFQSLLFEAVGRAVNPVGGA 82
6******************************************************************************** PP
DUF260 77 vgvilklqqqleqlkaelall 97
vg++++++++++q+++e++l+
evm.model.supercontig_106.63 83 VGLLWTGNWHVCQSAVETVLR 103
***************998775 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 210 aa
Download sequence Send
to blast |
MSCNGCRILR KGCSENCMLR QCLQWLDSPQ AQANATVFVA KFFGRAGLMS FISAVPQSQR 60
PALFQSLLFE AVGRAVNPVG GAVGLLWTGN WHVCQSAVET VLRGGVLQPL PEFYGAGPIP 120
DGDDCSESGI EVFRPVKADS RSVKRKRWDD DVAKFGSKDV LLSLGPESPE YRRAVSPSEE 180
SETTTLGSGS STNCSVVRGS ERPLLRLFV*
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