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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
evm.model.supercontig_104.22 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
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Family |
Dof |
Protein Properties |
Length: 298aa MW: 32512.8 Da PI: 6.7849 |
Description |
Dof family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
evm.model.supercontig_104.22 | genome | ASGPB | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-Dof | 118.2 | 3.2e-37 | 20 | 75 | 7 | 62 |
zf-Dof 7 kcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
+cprC s+ntkfCyynnysl+qPryfCk+CrryWtkGG+lrnvPvGgg+rk+++++
evm.model.supercontig_104.22 20 SCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKSRRAK 75
7***************************************************9976 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 298 aa
Download sequence Send
to blast |
MDRAGWIHHD HHRHHHISPS CPRCGSSNTK FCYYNNYSLT QPRYFCKGCR RYWTKGGSLR 60 NVPVGGGCRK SRRAKSSSRL SNSDHGVLII SKNSGSNTTS THLGYRGNDN DPVQKMDSLA 120 DSSSVMADGS HIDLALVYAN FLNQRPPEPA ADSKSGMIEV AELPASEFGI PSSLGFPYVD 180 ASSSGLNQEN RVLERLNYSD LSADPMVCSS GFDPVQNHEC SSHERSRHDY GLPPLPGEGA 240 AASWPNSSHV IMENDHGIQL AGQDPVLGPD QGQDPNLLFG NWSSFDLSID YAFSRSL*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HM366546 | 1e-32 | HM366546.1 Prunus persica clone PpDOF1 Dof-type zinc finger domain-containing protein mRNA, complete cds. |
GenBank | HM366547 | 1e-32 | HM366547.1 Prunus persica clone PpDOF2 Dof-type zinc finger domain-containing protein mRNA, complete cds. |