 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
evm.model.supercontig_1.76 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
|
| Family |
WRKY |
| Protein Properties |
Length: 542aa MW: 58633.6 Da PI: 7.516 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| evm.model.supercontig_1.76 | genome | ASGPB | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 109.5 | 1.6e-34 | 258 | 314 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
dDgynWrKYGqK+vkgsefprsYY+Ct+++Cpvkkkvers d++++ei+Y+g+Hnh+
evm.model.supercontig_1.76 258 DDGYNWRKYGQKQVKGSEFPRSYYKCTHPSCPVKKKVERSL-DGQITEIIYKGQHNHQ 314
8****************************************.***************8 PP
|
| 2 | WRKY | 105.3 | 3.1e-33 | 433 | 491 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK+vkg+++prsYY+Ct++gC+v+k+ver+++d ++v++tYeg+Hnhe
evm.model.supercontig_1.76 433 LDDGYKWRKYGQKVVKGNPYPRSYYKCTTPGCNVRKHVERASTDARAVITTYEGKHNHE 491
59********************************************************8 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009723 | Biological Process | response to ethylene |
| GO:0009751 | Biological Process | response to salicylic acid |
| GO:0009753 | Biological Process | response to jasmonic acid |
| GO:1900150 | Biological Process | regulation of defense response to fungus |
| GO:1900425 | Biological Process | negative regulation of defense response to bacterium |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 542 aa
Download sequence Send
to blast |
MANNQDHHSS STSKSKASPG APPRPTISLP PRPFADVFFN GGWPGSGAGL GMGFSPGPMT 60
LVSSFFSDSD DCKSFSQLLA GAMASPAAQQ RPGFPPHPPD DKGSGETNIS ASAGDGAGSS 120
GDFEGRLRQN RPTGLVITQP PSIFTEPPGL NPATLLDSQG FSLFSPGPFG MTHQQALMQV 180
TAQAAQANSN MHVQAEHSSS VPAATSEHLP STTVKTDVNQ QMALSIIDTR LATKESSDLS 240
LPEHRPQPPS FSIDKPADDG YNWRKYGQKQ VKGSEFPRSY YKCTHPSCPV KKKVERSLDG 300
QITEIIYKGQ HNHQPPQSNK RAKDNSSSHN QGNSEFSSRS QSDNFNKPKE GASVYSMSQK 360
DQELTHPTPE HVSCTSDSED VGDAEAGTDV KDEDEPDPKR RSMESRVIEP ASSHRTVTEP 420
RIIVQTTSEV DLLDDGYKWR KYGQKVVKGN PYPRSYYKCT TPGCNVRKHV ERASTDARAV 480
ITTYEGKHNH EVPTAKSSSH NTASSNASQL KPLNVVGEKL ALTNSNQQPV ARLRLKEEQI 540
T*
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor that binds specifically to the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Has a positive role in resistance to necrotrophic pathogens (e.g. Botrytis cinerea), but a negative effect on plant resistance to biotrophic pathogens (e.g. Pseudomonas syringae). {ECO:0000269|PubMed:18570649, ECO:0000269|PubMed:22219184}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: By biotic and abiotic stresses such as pathogen infection (e.g. Botrytis cinerea and Pseudomonas syringae), salicylic acid (SA), jasmonic acid (JA), ethylene (ACC), liquid infiltration or spraying, and strongly during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756, ECO:0000269|PubMed:18570649}. |
