 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
evm.model.supercontig_1.271 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
|
| Family |
AP2 |
| Protein Properties |
Length: 444aa MW: 48744.1 Da PI: 7.8021 |
| Description |
AP2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| evm.model.supercontig_1.271 | genome | ASGPB | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 54.1 | 3.9e-17 | 157 | 206 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g
evm.model.supercontig_1.271 157 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 206
78*******************......55************************997 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 444 aa
Download sequence Send
to blast |
MLDLNLDVLV ASESSSCDNH REDEKTMTVL AEPYKLTAEA RAGSVRTQME EEYSGTSNSS 60
IINSLDEAPT NAGVDDDDDR DEKYPSPDSV TQQLFPVAGE KSGPGVEFGF GVGSSVRLDR 120
QWLNLSCAKG SAEAIEGQKI VPQKVKKSRR GPRSRSSQYR GVTFYRRTGR WESHIWDCGK 180
QVYLGGFDTA HAAARAYDRA AIKFRGDDAD INFSLSDYKD EIKQMRHLSK EEFVHILRRQ 240
STGFSRGSSR FRGVTLHKCG RWEARIGQFL GKNAYDMAAT KCNGREAVTN FEQSNFKING 300
GSGQNLDLSL GISLTPSRRE NVGDLQACSS ETPLKGMSLL ETSASAYLGG QQPNPNTLLS 360
GMYPVSSPNL REQTGERAIE AASSMRSSLS WTWQSNGNVG QMPILNIAAS SGFSSTATLQ 420
QKIHYNNNNP TQNLCLVNHQ KFS*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). Regulates negatively the transition to flowering time and confers flowering time delay. {ECO:0000250, ECO:0000269|PubMed:14555699}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Repressed by miR172a-2/EAT. {ECO:0000269|PubMed:14555699}. |
