PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.supercontig_1.178
Organism
Carica papaya
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
Family ERF
Protein Properties Length: 380aa    MW: 41194.9 Da    PI: 4.5946
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.supercontig_1.178genomeASGPBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.69.7e-16131178152
                          AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkk 52 
                                  s+  GVr++k +g+W+AeIr+p++   ++r +lg+++t e+Aa a+ a + +
  evm.model.supercontig_1.178 131 SKPVGVRQRK-WGKWAAEIRHPVT---KTRMWLGTYDTLEQAANAYNAKKIE 178
                                  7899*****9.**********754...5******************988766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000187.79E-20131179No hitNo description
PfamPF008476.2E-10131177IPR001471AP2/ERF domain
SuperFamilySSF541714.97E-15132179IPR016177DNA-binding domain
PROSITE profilePS5103217.991132196IPR001471AP2/ERF domain
SMARTSM003801.4E-15132196IPR001471AP2/ERF domain
PRINTSPR003678.5E-7133144IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.3E-20135179IPR001471AP2/ERF domain
PRINTSPR003678.5E-7155171IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 380 aa     Download sequence    Send to blast
MPEPRKQSLN QTNKTCKKAT KKTNQTSDVP VSSEKSKMMR KIRVIVDDPY ATDSSSSDDE  60
PDYGKVRKRK RIVREIKLPI PIVASAQSNH SEPESSCQDS NYGSKTLVPK TPISKKRVLT  120
KTMSNRRPAG SKPVGVRQRK WGKWAAEIRH PVTKTRMWLG TYDTLEQAAN AYNAKKIEFD  180
AIAMAAAGTE KSNNLSCSVA ASHSHNTDPA ASSDGSESVL SHTSPSSVLE LDTSASASAS  240
ASASASNIDV DCGEPVKEGF TLDVDDDCDD LIKEEFGFNF ADLQIPDLGG FIDEPLMSGT  300
VEQELNFGGG MDYLFVDEFG KLMDDYCTID DLSIHGIQGD DPSDLPDCDF GDCDLELVVD  360
DDKFGFVDKV AAPLNIACP*
Cis-element ? help Back to Top
SourceLink
PlantRegMapevm.model.supercontig_1.178
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021910497.10.0ethylene-responsive transcription factor ERF119
RefseqXP_021910498.10.0ethylene-responsive transcription factor ERF119
TrEMBLA0A0D2PX391e-100A0A0D2PX39_GOSRA; Uncharacterized protein
TrEMBLA0A1U8KWE61e-100A0A1U8KWE6_GOSHI; ethylene-responsive transcription factor ERF119
STRINGevm.model.supercontig_1.1780.0(Carica papaya)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM25372671
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G25890.25e-53ERF family protein