PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.TU.contig_30412.2
Organism
Carica papaya
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
Family bZIP
Protein Properties Length: 317aa    MW: 35542.6 Da    PI: 7.397
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.TU.contig_30412.2genomeASGPBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_122.13.4e-072052511763
                            HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1  17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                            A rsR R++++i+eLe+ ++ L+ae ++   ele l +++  l +e+
  evm.TU.contig_30412.2 205 AHRSRVRRLQYIAELERSIQILQAEGSEVSAELEYLDQQILILSMEN 251
                            79************************************999888776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd147032.42E-12198243No hitNo description
SuperFamilySSF579594.98E-5204247No hitNo description
Gene3DG3DSA:1.20.5.1703.2E-6205247No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    Send to blast
MECLNGSSSM GDLIHIGKEA PITPPRNPIT LPHLDHTSSS ALVSDKFLED QGHHHRASSD  60
SFLLEEQPSW LDDLLNEPET PLCKGHRRSS SDSVTFLDTT AKPFKKEILI GGPSWISQTN  120
SNHHRQDLWS TAFYENIKQQ ESAQPRNGIN VTQSSSSVQT QAVAPFKTAG KSVWEGSEGS  180
SAKNGCSQAN AGSRSESKRA KQQVAHRSRV RRLQYIAELE RSIQILQAEG SEVSAELEYL  240
DQQILILSME NRALHLRLDS LSQVQQLKHL EQNMLEREIG RLQFLYQQQQ QQQKKNSARR  300
QSKNRDLDCQ LANLAI*
Cis-element ? help Back to Top
SourceLink
PlantRegMapevm.TU.contig_30412.2
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJN0884950.0JN088495.1 Vasconcellea monoica clone BAC-MN13O12, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021911685.10.0uncharacterized protein At4g06598-like isoform X2
STRINGevm.TU.contig_30412.20.0(Carica papaya)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM1493322
Representative plantOGRP42521219
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58110.26e-38bZIP family protein